From 2f1781ada00bdd5d4a0181d669f8f4b8d74fccc7 Mon Sep 17 00:00:00 2001 From: flu0r1ne Date: Mon, 26 Sep 2022 01:32:10 -0500 Subject: Add basic indexes --- ...ence.index.AJtrio_Illumina_2x250bps_06012016.HG003 | 19 +++++++++++++++++++ 1 file changed, 19 insertions(+) create mode 100644 hg003/250/sequence.index.AJtrio_Illumina_2x250bps_06012016.HG003 (limited to 'hg003/250/sequence.index.AJtrio_Illumina_2x250bps_06012016.HG003') diff --git a/hg003/250/sequence.index.AJtrio_Illumina_2x250bps_06012016.HG003 b/hg003/250/sequence.index.AJtrio_Illumina_2x250bps_06012016.HG003 new file mode 100644 index 0000000..571a911 --- /dev/null +++ b/hg003/250/sequence.index.AJtrio_Illumina_2x250bps_06012016.HG003 @@ -0,0 +1,19 @@ +FASTQ FASTQ_MD5 PAIRED_FASTQ PAIRED_FASTQ_MD5 NIST_SAMPLE_NAME +ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S1_L001_R1_001.fastq.gz ccefc90b1acc35ff1741191ce84982fb ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S1_L001_R2_001.fastq.gz 26e1a533247dd5f50537c26bbb74ec5b HG003 +ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S1_L001_R1_002.fastq.gz 7790dab4a8c6b0e8815cc2ca16daf02b ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S1_L001_R2_002.fastq.gz 568fe987259cfa5c6a5496e564518b94 HG003 +ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S1_L001_R1_003.fastq.gz 4a6ba482c80ab14106ac0cb9e044ede9 ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S1_L001_R2_003.fastq.gz 93202bf8ad6626b128e0efe3c799366e HG003 +ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S1_L001_R1_004.fastq.gz 6b7830b0e0ae41881393eee6406dbdc5 ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S1_L001_R2_004.fastq.gz 14c564caecc84630fd856e910aeb5d84 HG003 +ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S1_L001_R1_005.fastq.gz acfb876c305e9ef0664e445cb1ea82e3 ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S1_L001_R2_005.fastq.gz 7df80e66c1fd08169c799e704f319a31 HG003 +ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S1_L002_R1_001.fastq.gz ae60c410ae2f3a25d088f5a321c705bd ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S1_L002_R2_001.fastq.gz da9398235056a518a07a4828e018dd40 HG003 +ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S1_L002_R1_002.fastq.gz 6ee6479efcb8a4fafb24d6899c16d430 ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S1_L002_R2_002.fastq.gz 3cf010f7efd1ac53444e62008721ca50 HG003 +ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S1_L002_R1_003.fastq.gz 593be593b7b7fd214a9ff8f8a7816405 ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S1_L002_R2_003.fastq.gz 9341eb8a0fe198225fcb4de4dab5f6e5 HG003 +ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S1_L002_R1_004.fastq.gz 0aaa87c7a003033a5243509cdb12e99a ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S1_L002_R2_004.fastq.gz 544fc17370916a9a345bb01a742eacb0 HG003 +ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S1_L002_R1_005.fastq.gz 792e41789d7bd65ae52e77047492a53c ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S1_L002_R2_005.fastq.gz e3f56c9107ee87a4c88ddd515ff638d0 HG003 +ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S2_L001_R1_001.fastq.gz 7acb2bb7e2afb9c44f9fb70573825c50 ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S2_L001_R2_001.fastq.gz f56abfc951671bb690d0107e422069b4 HG003 +ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S2_L001_R1_002.fastq.gz f490062e0d672b3f511d48efad51106c ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S2_L001_R2_002.fastq.gz 504a609a7efdf3c3cbe490e8402cd049 HG003 +ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S2_L001_R1_003.fastq.gz 13aecb3de2328c47cf12647cd1fbbbf3 ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S2_L001_R2_003.fastq.gz 13aba308bcd2bcc060b22802e9f2b76a HG003 +ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S2_L001_R1_004.fastq.gz fe736532dcf62a85d23417493f4c7a7a ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S2_L001_R2_004.fastq.gz 5e11e2f5e23ffda78febc847137dadfd HG003 +ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S2_L002_R1_001.fastq.gz d2c607d5788425939e6c7909d9b14eab ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S2_L002_R2_001.fastq.gz 9a4afd938fbceb19fe5c9eccf38117ce HG003 +ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S2_L002_R1_002.fastq.gz 89080ebec92f9244eb327c4428d1635b ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S2_L002_R2_002.fastq.gz d8e5e31f7d66a3db16d75a0ef70f6d49 HG003 +ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S2_L002_R1_003.fastq.gz 8def51c56f915169b93235f7bf828a7b ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S2_L002_R2_003.fastq.gz 15d700fa821bd09c8c7616389c22a9ae HG003 +ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S2_L002_R1_004.fastq.gz d8098ade08dbf2afd90c49474c40c404 ftp://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG003_NA24149_father/NIST_Illumina_2x250bps/reads/D2_S2_L002_R2_004.fastq.gz 9cd97a1d0d4155d874893b994b9c04ab HG003 -- cgit v1.2.3